Yes generally that will do the trick.
What I do is fire up the burning tool, import the firmware and click the start button first.
Then have one end of my USB cable to the PC.
Then push a pin into the reset hole on the bottom of the case whilst I insert the USB cable into the port nearest the sd card (TX5 Pro).
You will then see the software erase the bootloader and start the download, at which point you can remove the pin and let it do it's stuff.
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